BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018G01LP1|AL427364
(668 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1802 286 4e-77
>3x_Contig1802
Length = 45229
Score = 286 bits (143), Expect = 4e-77
Identities = 250/287 (87%)
Strand = Plus / Plus
Query: 1 gtaagaatacagaaaacaaatacaatgattggaagaaatatattaatgttacsggaaaga 60
||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |
Sbjct: 14177 gtaagaatacagaaaacaaatactatgattggaagaaatatattaatgttactggaaata 14236
Query: 61 caatgtgcggggagcgacctatggggggattcctgtgtgccatgtcactgttgaacaaac 120
|||| ||||| ||||||||||| |||| |||| ||||||| |||||||||||||||||||
Sbjct: 14237 caatttgcggtgagcgacctattggggtattcttgtgtgctatgtcactgttgaacaaac 14296
Query: 121 caaatcagtytaattgggcccaccacccacaaagcagtcaatgcgttgatttagaggata 180
|| |||||| ||||||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 14297 catatcagtttaattgggctcattactcacaaagcagtcaatgcgttgatttagaggata 14356
Query: 181 gcagtgtaagcsatgcatccggatacctccaggtgaatatccagtccccatgtgtaaacc 240
||||||||||| ||||||| |||||| || || ||| |||| |||| ||||||||||
Sbjct: 14357 gcagtgtaagctatgcatctggatacttctagttgattatctagtctttatgtgtaaact 14416
Query: 241 gtccatgaaagamaacagtccgaccaasaacaacgaacacgattacc 287
|| |||||||| | ||| ||| || || || |||||||||||||
Sbjct: 14417 gtttatgaaagaaattagttcgattaataataatgaacacgattacc 14463
Score = 206 bits (103), Expect = 5e-53
Identities = 160/179 (89%)
Strand = Plus / Plus
Query: 490 agcaacaagcccgaccaaatcgacgaccccggcagagcaaccgcattcgccgccggacca 549
||||||||| |||||||||||||||| | || |||| ||||| ||||| | || ||||
Sbjct: 14666 agcaacaagttcgaccaaatcgacgactctggtagagtaaccgtattcgttgtcgtacca 14725
Query: 550 ggcaaccaacccaacgaaccccggagacaattggataccggcagcagcatcgaagaggaa 609
|| ||||||| ||||||| |||||||||||||||||||||||||||||||||| | |
Sbjct: 14726 ggtaaccaacttaacgaactttggagacaattggataccggcagcagcatcgaagatgga 14785
Query: 610 agagttggtgtcacccaagaagtcagaggagacaacagcatcttcagtgtaacccaaga 668
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14786 agagttggtgtcacccaagaagtcagaggagacaacagcatcttcagtgtaacccaaga 14844
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3043
Number of Sequences: 1807
Number of extensions: 3043
Number of successful extensions: 79
Number of sequences better than 1.0e-20: 1
length of query: 668
length of database: 10,358,551
effective HSP length: 16
effective length of query: 652
effective length of database: 10,329,639
effective search space: 6734924628
effective search space used: 6734924628
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)